Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793863.1_cds_XP_016435836.1_3090
CDS Infomation

[gene=LOC107762039] [db_xref=GeneID:107762039] [protein=probable trehalose-phosphate phosphatase H] [protein_id=XP_016435836.1] [location=join(52107..52355,52475..52615,52721..52885,52984..53043,53147..53248,53354..53431,53557..53697,53791..53883,54028..54096)] [gbkey=CDS]
Sequence

ATGACGAACCAGAATGTGATTGTTTCTGACCCAAGATCAGGGTTGGAGTCTTCTTTCTTA
TCGTTCTCACCGGCTGTTCCCGGACCACTACCGCCGCCGGGGAGATTCATCGCCGTTCCG
GCGAAGAAAACATTCAAAAACATTGAGTCTGCTGCCGGAGATCATAGGATCACTGCTTTA
CTTGATTCCATGAGAGCTTCTTCCCCACCTCGTAGATCCTCTGAAACTGAAAATCTCAAG
TCTTGGATTGTTCATCATCCCTCAGCTTTGGACATGTTCGAGGAAATTATAAATGCTTCA
AAAGGGAAACAAATAATAATGTTTTTGGACTATGATGGTACATTGTCTCCCATTGTTGAT
GATCCTGACAAAGCTTTTATGACTGCTGAGATGAGGGAAGCAGTGAGAGACACAGCCAAG
TATTTTCCTACAGCAATAGTGAGTGGAAGATGCAGAGCAAAAGTCTTTAATTTTGTAAAG
TTATCAGAACTGTATTATGCTGGAAGTCATGGAATGGACATCAAAGCGCCTGCTAAAGGA
CGCAAATATAGAAATGGAAATAATCAAACTGTTCTCTGCCAACCTGCCAGAGAATTTTTA
CCCATGATTGATGAGGTATATAAATCTTTAGTGGAGAAAACAAAATCTATACCAGGAGCG
AAAGTGGAAAACAACAAATTCTGCTTATCCGTACATTTCCGTCGTGTTGAAGAAAAGAGG
TGGACTGAATTAGCTGAGCAAGTGAAGTCAGTGACTAAGGAATACCCAAAGCTACGATTA
ACCCAAGGAAGAAAGGTTTTGGAGATTCGTCCCAGCATTAAATGGGACAAGGGAAAGGCA
CTTGAATTTTTGTTGGAATCATTAGGGTATGCTAATTCAAATGATGTTTTGCCTATATAC
ATTGGCGATGATCGAACAGATGAAGATGCTTTCAAGGTTTTGCGCGACAGAGGACAAGGT
TTTGGAATATTAGTGTCCAAATCACCTAAAGAAACGAATGCTTCCTATTCTTTGCAAGAG
CCATTAGAGGTTATGTACTTTTTAAACCGTTTGGTGGAGTGGAAAAGATCGTCCTTGCAA
AGATATCAGAGGAAATAA

Peptide Sequence

PEP ID

XP_016435836.1
PEP Infomation

PREDICTED: probable trehalose-phosphate phosphatase H [Nicotiana tabacum]
Sequence

MTNQNVIVSDPRSGLESSFLSFSPAVPGPLPPPGRFIAVPAKKTFKNIESAAGDHRITAL
LDSMRASSPPRRSSETENLKSWIVHHPSALDMFEEIINASKGKQIIMFLDYDGTLSPIVD
DPDKAFMTAEMREAVRDTAKYFPTAIVSGRCRAKVFNFVKLSELYYAGSHGMDIKAPAKG
RKYRNGNNQTVLCQPAREFLPMIDEVYKSLVEKTKSIPGAKVENNKFCLSVHFRRVEEKR
WTELAEQVKSVTKEYPKLRLTQGRKVLEIRPSIKWDKGKALEFLLESLGYANSNDVLPIY
IGDDRTDEDAFKVLRDRGQGFGILVSKSPKETNASYSLQEPLEVMYFLNRLVEWKRSSLQ
RYQRK

Transcript Sequence

Gene sequence data has not been registered.